Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN11O75508 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.7■□□□□ 0.26
CLDN11O75508 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CLDN11O75508 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN11O75508 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN11O75508 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 AC093512.1-201ENST00000617969 520 ntBASIC16.7■□□□□ 0.26
CLDN11O75508 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN11O75508 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN11O75508 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLDN11O75508 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN11O75508 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN11O75508 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CLDN11O75508 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN11O75508 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN11O75508 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN11O75508 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLDN11O75508 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN11O75508 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN11O75508 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CLDN11O75508 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CLDN11O75508 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN11O75508 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN11O75508 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.69■□□□□ 0.26
CLDN11O75508 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN11O75508 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN11O75508 AC026979.3-201ENST00000607315 403 ntBASIC16.69■□□□□ 0.26
CLDN11O75508 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CLDN11O75508 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN11O75508 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CLDN11O75508 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.69■□□□□ 0.26
CLDN11O75508 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.69■□□□□ 0.26
CLDN11O75508 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN11O75508 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN11O75508 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CLDN11O75508 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN11O75508 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.68■□□□□ 0.26
CLDN11O75508 AC105021.1-202ENST00000570572 669 ntBASIC16.68■□□□□ 0.26
CLDN11O75508 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN11O75508 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN11O75508 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN11O75508 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN11O75508 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN11O75508 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 CROCCP1-201ENST00000426910 5675 ntBASIC16.68■□□□□ 0.26
CLDN11O75508 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN11O75508 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN11O75508 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN11O75508 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN11O75508 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms