Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.64□□□□□ -0.07
PFDN1O60925 CICP11-201ENST00000434745 2827 ntBASIC14.64□□□□□ -0.07
PFDN1O60925 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PFDN1O60925 AC089987.1-201ENST00000551654 2209 ntBASIC14.64□□□□□ -0.07
PFDN1O60925 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.64□□□□□ -0.07
PFDN1O60925 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.64□□□□□ -0.07
PFDN1O60925 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.64□□□□□ -0.07
PFDN1O60925 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.64□□□□□ -0.07
PFDN1O60925 AC005829.2-201ENST00000571422 1056 ntBASIC14.64□□□□□ -0.07
PFDN1O60925 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.64□□□□□ -0.07
PFDN1O60925 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
PFDN1O60925 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PFDN1O60925 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PFDN1O60925 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PFDN1O60925 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 CICP16-201ENST00000502609 2813 ntBASIC14.63□□□□□ -0.07
PFDN1O60925 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 POU5F1P3-201ENST00000428824 1078 ntBASIC14.63□□□□□ -0.07
PFDN1O60925 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.63□□□□□ -0.07
PFDN1O60925 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
PFDN1O60925 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.63□□□□□ -0.07
PFDN1O60925 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PFDN1O60925 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PFDN1O60925 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
PFDN1O60925 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PFDN1O60925 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PFDN1O60925 AL118506.1-201ENST00000601296 3082 ntBASIC14.62□□□□□ -0.07
PFDN1O60925 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
PFDN1O60925 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.62□□□□□ -0.07
PFDN1O60925 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PFDN1O60925 KRT17P1-201ENST00000399211 1546 ntBASIC14.62□□□□□ -0.07
PFDN1O60925 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PFDN1O60925 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PFDN1O60925 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PFDN1O60925 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.62□□□□□ -0.07
PFDN1O60925 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PFDN1O60925 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PFDN1O60925 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms