Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
KNCNA6PVL3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
KNCNA6PVL3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 AC140658.5-201ENST00000438532 169 ntBASIC12.32□□□□□ -0.44
KNCNA6PVL3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 PGAM5P1-201ENST00000518923 814 ntBASIC12.32□□□□□ -0.44
KNCNA6PVL3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 MIR600HG-201ENST00000449175 5984 ntBASIC12.32□□□□□ -0.44
KNCNA6PVL3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 AC018695.7-201ENST00000624587 2492 ntBASIC12.32□□□□□ -0.44
KNCNA6PVL3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KNCNA6PVL3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KNCNA6PVL3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PCGF3-213ENST00000620529 1899 ntBASIC12.31□□□□□ -0.44
KNCNA6PVL3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KNCNA6PVL3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.31□□□□□ -0.44
KNCNA6PVL3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms