Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3FA6NER0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 AC005034.1-201ENST00000426657 489 ntBASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 AC026979.3-201ENST00000607315 403 ntBASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TBC1D3FA6NER0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 AC009477.1-201ENST00000452936 217 ntBASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 AC061975.2-201ENST00000581722 295 ntBASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.27■□□□□ 0.2
TBC1D3FA6NER0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms