Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 GPAA1P2-202ENST00000606848 1787 ntBASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.46■□□□□ 0.07
CCDC187A0A096LP49 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CCDC187A0A096LP49 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 ELK1P1-201ENST00000485699 580 ntBASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 RRP7BP-205ENST00000566851 833 ntBASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC187A0A096LP49 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms