Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 KRT8P41-201ENST00000533985 1514 ntBASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LINC01558Q9Y6Z2 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 DUX4L19-201ENST00000557448 1267 ntBASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AC134407.3-201ENST00000624035 2139 ntBASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AC019069.1-201ENST00000610008 1333 ntBASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TNN-202ENST00000621086 4234 ntTSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 KRT8P7-201ENST00000533003 1432 ntBASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 FRMD8P1-201ENST00000440433 1524 ntBASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 BNIP3P1-202ENST00000550043 1585 ntBASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01558Q9Y6Z2 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms