Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.21■□□□□ 0.5
PDLIM7Q9NR12 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PDLIM7Q9NR12 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 AC114501.2-201ENST00000439631 535 ntBASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 RNA5SP410-201ENST00000516285 106 ntBASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.2■□□□□ 0.5
PDLIM7Q9NR12 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 AC234783.1-201ENST00000441761 496 ntBASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 KRT223P-202ENST00000449164 1292 ntBASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 SNX29P1-201ENST00000548357 1007 ntBASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 AC099568.2-201ENST00000609194 695 ntBASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDLIM7Q9NR12 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 AL589702.1-201ENST00000641229 1509 ntBASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 PRORSD1P-202ENST00000563365 2154 ntBASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
PDLIM7Q9NR12 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms