Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.34■□□□□ 0.37
CD248Q9HCU0 ADH5P3-201ENST00000433842 1137 ntBASIC17.34■□□□□ 0.37
CD248Q9HCU0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 AC087163.2-201ENST00000457299 853 ntBASIC17.34■□□□□ 0.37
CD248Q9HCU0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 AC068137.2-201ENST00000605408 478 ntBASIC17.34■□□□□ 0.37
CD248Q9HCU0 AC092919.2-201ENST00000623631 1645 ntBASIC17.34■□□□□ 0.37
CD248Q9HCU0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CD248Q9HCU0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD248Q9HCU0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CD248Q9HCU0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD248Q9HCU0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD248Q9HCU0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD248Q9HCU0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CD248Q9HCU0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD248Q9HCU0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD248Q9HCU0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CD248Q9HCU0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD248Q9HCU0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.33■□□□□ 0.37
CD248Q9HCU0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 AL645939.2-201ENST00000427340 991 ntBASIC17.33■□□□□ 0.36
CD248Q9HCU0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 AC105339.1-204ENST00000636249 355 ntBASIC17.33■□□□□ 0.36
CD248Q9HCU0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.33■□□□□ 0.36
CD248Q9HCU0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD248Q9HCU0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 AC004461.1-201ENST00000412461 403 ntBASIC17.32■□□□□ 0.36
CD248Q9HCU0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD248Q9HCU0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD248Q9HCU0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CD248Q9HCU0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD248Q9HCU0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms