Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
KRTAP4-3Q9BYR4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 BASP1P1-201ENST00000430708 665 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC093724.1-201ENST00000448659 1027 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AL589987.1-201ENST00000453380 819 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AL512638.1-201ENST00000457493 794 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC067863.1-201ENST00000494933 530 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC105021.1-202ENST00000570572 669 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 MIR3909-201ENST00000579518 119 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AL844908.2-201ENST00000609461 460 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC007967.4-201ENST00000614700 386 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC073592.8-201ENST00000624126 511 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AC008761.3-201ENST00000624803 892 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AL139384.1-201ENST00000612143 3047 ntBASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC5.56□□□□□ -1.52
KRTAP4-3Q9BYR4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms