Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.93□□□□□ -0.66
LITAFQ99732 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LITAFQ99732 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
LITAFQ99732 CD9-202ENST00000382515 1229 ntTSL 5 BASIC10.93□□□□□ -0.66
LITAFQ99732 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC10.93□□□□□ -0.66
LITAFQ99732 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 AC092597.1-201ENST00000487352 616 ntBASIC10.93□□□□□ -0.66
LITAFQ99732 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC10.93□□□□□ -0.66
LITAFQ99732 MPDU1-223ENST00000582151 728 ntBASIC10.93□□□□□ -0.66
LITAFQ99732 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 Z99916.2-201ENST00000604037 246 ntBASIC10.93□□□□□ -0.66
LITAFQ99732 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC10.93□□□□□ -0.66
LITAFQ99732 AC141257.4-201ENST00000634557 245 ntBASIC10.93□□□□□ -0.66
LITAFQ99732 AC136944.6-201ENST00000634818 245 ntBASIC10.93□□□□□ -0.66
LITAFQ99732 GLDC-219ENST00000640208 420 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 MROH4P-201ENST00000431302 1578 ntBASIC10.93□□□□□ -0.66
LITAFQ99732 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
LITAFQ99732 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 AC004817.3-201ENST00000602957 2129 ntBASIC10.93□□□□□ -0.66
LITAFQ99732 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.93□□□□□ -0.66
LITAFQ99732 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.93□□□□□ -0.66
LITAFQ99732 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LITAFQ99732 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LITAFQ99732 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
LITAFQ99732 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 ING5-213ENST00000636051 4199 ntTSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.92□□□□□ -0.66
LITAFQ99732 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LITAFQ99732 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LITAFQ99732 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC10.92□□□□□ -0.66
LITAFQ99732 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC10.92□□□□□ -0.66
LITAFQ99732 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms