Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.98■□□□□ 0.31
IFT43Q96FT9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 AL513480.1-201ENST00000451731 511 ntBASIC16.98■□□□□ 0.31
IFT43Q96FT9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 MIR4492-201ENST00000581627 80 ntBASIC16.98■□□□□ 0.31
IFT43Q96FT9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IFT43Q96FT9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 AC105917.1-201ENST00000506637 2539 ntBASIC16.98■□□□□ 0.31
IFT43Q96FT9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 ELL2P1-201ENST00000413990 1906 ntBASIC16.98■□□□□ 0.31
IFT43Q96FT9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
IFT43Q96FT9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 AC012569.1-201ENST00000591191 1524 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 ALG1L5P-201ENST00000482043 771 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 KRT19P2-202ENST00000557173 1012 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 SNHG9-202ENST00000564014 471 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 CYP2A7P1-201ENST00000595391 815 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 AC023141.13-201ENST00000604991 943 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 ACTL9-202ENST00000612068 1252 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 AL139011.1-202ENST00000642063 584 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IFT43Q96FT9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
IFT43Q96FT9 HLA-A-202ENST00000376806 1854 ntBASIC16.97■□□□□ 0.31
IFT43Q96FT9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IFT43Q96FT9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 HLA-J-202ENST00000469281 1241 ntBASIC16.96■□□□□ 0.31
IFT43Q96FT9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.96■□□□□ 0.31
IFT43Q96FT9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms