Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.56□□□□□ -0.08
APH1AQ96BI3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APH1AQ96BI3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APH1AQ96BI3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
APH1AQ96BI3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 AC073389.1-201ENST00000595595 795 ntBASIC14.55□□□□□ -0.08
APH1AQ96BI3 AC027612.4-201ENST00000605371 583 ntBASIC14.55□□□□□ -0.08
APH1AQ96BI3 AC009093.7-201ENST00000623853 1223 ntBASIC14.55□□□□□ -0.08
APH1AQ96BI3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
APH1AQ96BI3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
APH1AQ96BI3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 MIR346-201ENST00000362234 95 ntBASIC14.54□□□□□ -0.08
APH1AQ96BI3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 TSEN15P1-201ENST00000423257 515 ntBASIC14.54□□□□□ -0.08
APH1AQ96BI3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 POU5F1P6-201ENST00000466990 990 ntBASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC092183.1-201ENST00000469884 875 ntBASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 SLC25A39P2-201ENST00000537614 270 ntBASIC14.54□□□□□ -0.08
APH1AQ96BI3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC093520.2-201ENST00000561830 333 ntBASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
APH1AQ96BI3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
APH1AQ96BI3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
APH1AQ96BI3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
APH1AQ96BI3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
APH1AQ96BI3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms