Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 POU5F1P6-201ENST00000466990 990 ntBASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 AC055717.3-201ENST00000622967 595 ntBASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.57■□□□□ 0.24
LPCAT1Q8NF37 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 SPCS2P4-201ENST00000436160 681 ntBASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 AC027307.2-201ENST00000591252 911 ntBASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 AC105339.1-204ENST00000636249 355 ntBASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 AC134684.3-201ENST00000641758 218 ntBASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LPCAT1Q8NF37 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
LPCAT1Q8NF37 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms