Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PAF1Q8N7H5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 AD000864.1-201ENST00000624076 2295 ntBASIC16.91■□□□□ 0.3
PAF1Q8N7H5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 AC002056.1-201ENST00000395613 760 ntBASIC16.91■□□□□ 0.3
PAF1Q8N7H5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 AC005829.1-201ENST00000570002 483 ntBASIC16.91■□□□□ 0.3
PAF1Q8N7H5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.91■□□□□ 0.3
PAF1Q8N7H5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 AC006277.1-201ENST00000624348 1610 ntBASIC16.91■□□□□ 0.3
PAF1Q8N7H5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PAF1Q8N7H5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 AC022211.2-201ENST00000585075 2527 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 AC092919.2-201ENST00000623631 1645 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 UPF3AP3-201ENST00000420996 769 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 MCCD1P2-201ENST00000423228 335 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 CEND1P1-201ENST00000451006 455 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 AC091812.2-201ENST00000619081 385 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 C20orf181-201ENST00000623918 480 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 SBF1P1-201ENST00000444527 5631 ntBASIC16.9■□□□□ 0.3
PAF1Q8N7H5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.9■□□□□ 0.3
PAF1Q8N7H5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms