Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AC084121.4-201ENST00000641598 221 ntBASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AF228730.8-201ENST00000642140 221 ntBASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 AC020765.3-201ENST00000613051 740 ntBASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH20Q8N6Y1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 HLA-J-203ENST00000494367 1087 ntBASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 AC105233.2-201ENST00000523697 349 ntBASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 AF228730.5-201ENST00000530288 346 ntBASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 UXT-AS1-201ENST00000590504 1525 ntBASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms