Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.38■□□□□ 0.21
APLFQ8IW19 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.38■□□□□ 0.21
APLFQ8IW19 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.38■□□□□ 0.21
APLFQ8IW19 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APLFQ8IW19 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
APLFQ8IW19 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
APLFQ8IW19 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.37■□□□□ 0.21
APLFQ8IW19 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
APLFQ8IW19 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
APLFQ8IW19 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.37■□□□□ 0.21
APLFQ8IW19 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.37■□□□□ 0.21
APLFQ8IW19 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.37■□□□□ 0.21
APLFQ8IW19 AC023274.1-201ENST00000418278 595 ntBASIC16.37■□□□□ 0.21
APLFQ8IW19 MCCD1P2-201ENST00000423228 335 ntBASIC16.37■□□□□ 0.21
APLFQ8IW19 AP006288.1-201ENST00000446065 395 ntBASIC16.37■□□□□ 0.21
APLFQ8IW19 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.37■□□□□ 0.21
APLFQ8IW19 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.37■□□□□ 0.21
APLFQ8IW19 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.37■□□□□ 0.21
APLFQ8IW19 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.37■□□□□ 0.21
APLFQ8IW19 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.37■□□□□ 0.21
APLFQ8IW19 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.37■□□□□ 0.21
APLFQ8IW19 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.37■□□□□ 0.21
APLFQ8IW19 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.37■□□□□ 0.21
APLFQ8IW19 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
APLFQ8IW19 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
APLFQ8IW19 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.37■□□□□ 0.21
APLFQ8IW19 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
APLFQ8IW19 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
APLFQ8IW19 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
APLFQ8IW19 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APLFQ8IW19 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.36■□□□□ 0.21
APLFQ8IW19 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
APLFQ8IW19 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 AC104581.4-201ENST00000623126 3052 ntBASIC16.36■□□□□ 0.21
APLFQ8IW19 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 COX5BP2-201ENST00000392354 334 ntBASIC16.36■□□□□ 0.21
APLFQ8IW19 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.36■□□□□ 0.21
APLFQ8IW19 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.36■□□□□ 0.21
APLFQ8IW19 DNAJB3-202ENST00000449667 1266 ntBASIC16.36■□□□□ 0.21
APLFQ8IW19 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.36■□□□□ 0.21
APLFQ8IW19 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.36■□□□□ 0.21
APLFQ8IW19 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.36■□□□□ 0.21
APLFQ8IW19 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.36■□□□□ 0.21
APLFQ8IW19 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.36■□□□□ 0.21
APLFQ8IW19 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.36■□□□□ 0.21
APLFQ8IW19 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.36■□□□□ 0.21
APLFQ8IW19 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.36■□□□□ 0.21
APLFQ8IW19 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
APLFQ8IW19 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms