Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 LINC02228-204ENST00000642115 2962 ntBASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 OR7E14P-202ENST00000530490 1290 ntBASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 CYP2A7P1-201ENST00000595391 815 ntBASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 CLEC4GP1-201ENST00000596555 870 ntBASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SLC22A20-204ENST00000530038 1673 ntBASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC50Q8IVM0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 AL353732.1-201ENST00000569618 1459 ntBASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC50Q8IVM0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC50Q8IVM0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms