Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB43Q86YS6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 TOP3BP1-201ENST00000420768 1380 ntBASIC15.75■□□□□ 0.11
RAB43Q86YS6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 FAM8A3P-201ENST00000427218 844 ntBASIC15.75■□□□□ 0.11
RAB43Q86YS6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 CNN2P2-201ENST00000443536 909 ntBASIC15.75■□□□□ 0.11
RAB43Q86YS6 CNN2P3-201ENST00000450201 906 ntBASIC15.75■□□□□ 0.11
RAB43Q86YS6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.75■□□□□ 0.11
RAB43Q86YS6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 DUX4L17-201ENST00000557360 1267 ntBASIC15.75■□□□□ 0.11
RAB43Q86YS6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 AL136317.3-201ENST00000618497 906 ntBASIC15.75■□□□□ 0.11
RAB43Q86YS6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB43Q86YS6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB43Q86YS6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 AC087641.1-201ENST00000557561 1021 ntBASIC15.74■□□□□ 0.11
RAB43Q86YS6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 AL021920.2-201ENST00000624828 1351 ntBASIC15.74■□□□□ 0.11
RAB43Q86YS6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RAB43Q86YS6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAB43Q86YS6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB43Q86YS6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms