Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 HLA-V-204ENST00000476601 1289 ntBASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.21■□□□□ 0.51
SWSAP1Q6NVH7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
SWSAP1Q6NVH7 AC079328.2-201ENST00000561241 3354 ntBASIC18.21■□□□□ 0.5
SWSAP1Q6NVH7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 CETN4P-206ENST00000642099 2168 ntBASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 NKILA-202ENST00000614771 2598 ntBASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 RPL37AP1-201ENST00000412502 279 ntBASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 POU5F1P6-201ENST00000466990 990 ntBASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SWSAP1Q6NVH7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 TSSK5P-201ENST00000423978 907 ntBASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 TSPY16P-201ENST00000449843 468 ntBASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 AC004890.2-204ENST00000481968 304 ntBASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SWSAP1Q6NVH7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SWSAP1Q6NVH7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms