Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 DOC2GP-204ENST00000639052 2548 ntBASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST2H2AA3Q6FI13 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 AC092474.2-201ENST00000424288 719 ntBASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 AC074386.1-202ENST00000463561 864 ntBASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 AL161645.1-201ENST00000622716 1255 ntBASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HIST2H2AA3Q6FI13 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
HIST2H2AA3Q6FI13 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 MIR600HG-201ENST00000449175 5984 ntBASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 MTHFR-217ENST00000641820 1569 ntBASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 AC140113.2-201ENST00000604370 208 ntBASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 NORAD-201ENST00000565493 5339 ntBASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST2H2AA3Q6FI13 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 AC005622.1-201ENST00000636801 1703 ntBASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 AC126755.1-201ENST00000525846 6405 ntBASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST2H2AA3Q6FI13 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms