Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AC008267.7-201ENST00000624570 1194 ntBASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
PTPN20Q4JDL3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 AC142381.1-201ENST00000426099 345 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SPDYE11-202ENST00000450699 704 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 CEND1P1-201ENST00000451006 455 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 TIMM8BP1-201ENST00000452384 211 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 LINC01225-203ENST00000563550 1244 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SPDYE9P-201ENST00000570642 692 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 MIR4469-201ENST00000583919 79 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SPDYE10P-202ENST00000612005 668 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SPDYE8P-202ENST00000612377 668 ntBASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN20Q4JDL3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 AC112482.1-201ENST00000492080 688 ntBASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 AC105233.2-201ENST00000523697 349 ntBASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 AF228730.5-201ENST00000530288 346 ntBASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN20Q4JDL3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 AC024909.3-201ENST00000611513 2257 ntBASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTPN20Q4JDL3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms