Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 LINC00982-205ENST00000420957 435 ntBASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 AL020989.1-201ENST00000422979 469 ntBASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 TSPY22P-201ENST00000427496 604 ntBASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 AC011498.5-201ENST00000592027 486 ntBASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 LINC01144-201ENST00000626198 1710 ntBASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ANKRD55Q3KP44 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 UPK3BP1-201ENST00000428678 509 ntBASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 AC091607.1-201ENST00000490318 1060 ntBASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 AP003680.1-201ENST00000598970 3660 ntBASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 TOP3BP1-201ENST00000420768 1380 ntBASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 GPAA1P2-202ENST00000606848 1787 ntBASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ANKRD55Q3KP44 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.67□□□□□ -0.22
ANKRD55Q3KP44 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.67□□□□□ -0.22
ANKRD55Q3KP44 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.67□□□□□ -0.22
ANKRD55Q3KP44 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.67□□□□□ -0.22
ANKRD55Q3KP44 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms