Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 AC003669.1-201ENST00000334569 611 ntBASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 AC005912.2-201ENST00000619492 2400 ntBASIC17.45■□□□□ 0.38
ERCC6LQ2NKX8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 PCGF3-213ENST00000620529 1899 ntBASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC6LQ2NKX8 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 MIR648-201ENST00000385046 94 ntBASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 FAM87A-204ENST00000613235 858 ntBASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ERCC6LQ2NKX8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms