Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS4XP62701 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS4XP62701 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RPS4XP62701 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.83□□□□□ -0.04
RPS4XP62701 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS4XP62701 AL513480.1-201ENST00000451731 511 ntBASIC14.83□□□□□ -0.04
RPS4XP62701 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS4XP62701 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RPS4XP62701 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS4XP62701 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.83□□□□□ -0.04
RPS4XP62701 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RPS4XP62701 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.83□□□□□ -0.04
RPS4XP62701 AC018845.2-201ENST00000568326 409 ntBASIC14.83□□□□□ -0.04
RPS4XP62701 AC027796.2-201ENST00000575326 344 ntBASIC14.83□□□□□ -0.04
RPS4XP62701 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.83□□□□□ -0.04
RPS4XP62701 MIR4469-201ENST00000583919 79 ntBASIC14.83□□□□□ -0.04
RPS4XP62701 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.83□□□□□ -0.04
RPS4XP62701 AL355385.1-201ENST00000606123 409 ntBASIC14.83□□□□□ -0.04
RPS4XP62701 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPS4XP62701 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPS4XP62701 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.83□□□□□ -0.04
RPS4XP62701 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPS4XP62701 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPS4XP62701 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS4XP62701 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS4XP62701 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS4XP62701 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPS4XP62701 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.83□□□□□ -0.04
RPS4XP62701 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RPS4XP62701 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS4XP62701 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS4XP62701 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS4XP62701 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS4XP62701 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS4XP62701 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS4XP62701 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS4XP62701 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.82□□□□□ -0.04
RPS4XP62701 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS4XP62701 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.82□□□□□ -0.04
RPS4XP62701 YBX1P5-201ENST00000509441 847 ntBASIC14.82□□□□□ -0.04
RPS4XP62701 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.82□□□□□ -0.04
RPS4XP62701 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPS4XP62701 AC109635.5-201ENST00000533593 962 ntBASIC14.82□□□□□ -0.04
RPS4XP62701 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.82□□□□□ -0.04
RPS4XP62701 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.82□□□□□ -0.04
RPS4XP62701 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RPS4XP62701 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 AC005622.1-201ENST00000636801 1703 ntBASIC14.82□□□□□ -0.04
RPS4XP62701 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RPS4XP62701 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 AC010491.1-201ENST00000563101 2797 ntBASIC14.82□□□□□ -0.04
RPS4XP62701 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RPS4XP62701 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
RPS4XP62701 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.82□□□□□ -0.04
RPS4XP62701 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RPS4XP62701 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RPS4XP62701 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RPS4XP62701 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
RPS4XP62701 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS4XP62701 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPS4XP62701 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPS4XP62701 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS4XP62701 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS4XP62701 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPS4XP62701 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS4XP62701 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.81□□□□□ -0.04
RPS4XP62701 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS4XP62701 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS4XP62701 MIR648-201ENST00000385046 94 ntBASIC14.81□□□□□ -0.04
RPS4XP62701 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS4XP62701 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS4XP62701 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS4XP62701 AC254562.1-201ENST00000417586 456 ntBASIC14.81□□□□□ -0.04
RPS4XP62701 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms