Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
UBE2D3P61077 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.75□□□□□ -0.53
UBE2D3P61077 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D3P61077 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
UBE2D3P61077 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.75□□□□□ -0.53
UBE2D3P61077 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBE2D3P61077 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 AC131009.4-201ENST00000624048 1740 ntBASIC11.74□□□□□ -0.53
UBE2D3P61077 AL512652.2-201ENST00000625156 1716 ntBASIC11.74□□□□□ -0.53
UBE2D3P61077 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
UBE2D3P61077 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 CICP4-201ENST00000447359 2812 ntBASIC11.74□□□□□ -0.53
UBE2D3P61077 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.74□□□□□ -0.53
UBE2D3P61077 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.74□□□□□ -0.53
UBE2D3P61077 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.74□□□□□ -0.53
UBE2D3P61077 ELK2BP-201ENST00000415014 1224 ntBASIC11.74□□□□□ -0.53
UBE2D3P61077 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.74□□□□□ -0.53
UBE2D3P61077 AC025062.2-201ENST00000605477 670 ntBASIC11.74□□□□□ -0.53
UBE2D3P61077 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
UBE2D3P61077 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 AC006504.4-201ENST00000592118 1568 ntBASIC11.74□□□□□ -0.53
UBE2D3P61077 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.74□□□□□ -0.53
UBE2D3P61077 AL031731.1-201ENST00000642131 2094 ntBASIC11.74□□□□□ -0.53
UBE2D3P61077 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.74□□□□□ -0.53
UBE2D3P61077 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBE2D3P61077 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.73□□□□□ -0.53
UBE2D3P61077 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.73□□□□□ -0.53
UBE2D3P61077 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D3P61077 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.73□□□□□ -0.53
UBE2D3P61077 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D3P61077 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D3P61077 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
UBE2D3P61077 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D3P61077 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms