Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 TERF1P1-201ENST00000311003 1181 ntBASIC14.45□□□□□ -0.1
RAB3BP20337 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RAB3BP20337 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RAB3BP20337 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 AC091607.1-201ENST00000490318 1060 ntBASIC14.45□□□□□ -0.1
RAB3BP20337 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RAB3BP20337 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3BP20337 MIR4492-201ENST00000581627 80 ntBASIC14.45□□□□□ -0.1
RAB3BP20337 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.45□□□□□ -0.1
RAB3BP20337 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3BP20337 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB3BP20337 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3BP20337 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 FAM45BP-202ENST00000592932 1624 ntBASIC14.44□□□□□ -0.1
RAB3BP20337 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
RAB3BP20337 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3BP20337 SSR4P1-203ENST00000599569 2260 ntBASIC14.44□□□□□ -0.1
RAB3BP20337 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB3BP20337 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 SIGLEC16-201ENST00000599858 1437 ntBASIC14.44□□□□□ -0.1
RAB3BP20337 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RAB3BP20337 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB3BP20337 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB3BP20337 MPDU1-223ENST00000582151 728 ntBASIC14.44□□□□□ -0.1
RAB3BP20337 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3BP20337 AC005363.2-201ENST00000618631 242 ntBASIC14.44□□□□□ -0.1
RAB3BP20337 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.44□□□□□ -0.1
RAB3BP20337 AP000867.4-201ENST00000641616 219 ntBASIC14.44□□□□□ -0.1
RAB3BP20337 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
RAB3BP20337 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3BP20337 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3BP20337 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RAB3BP20337 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3BP20337 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB3BP20337 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB3BP20337 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB3BP20337 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
RAB3BP20337 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB3BP20337 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3BP20337 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms