Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 AC104640.1-201ENST00000562617 2109 ntBASIC15.31■□□□□ 0.04
TNFRSF1BP20333 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFRSF1BP20333 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.3■□□□□ 0.04
TNFRSF1BP20333 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 AC107918.4-202ENST00000641623 219 ntBASIC15.3■□□□□ 0.04
TNFRSF1BP20333 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFRSF1BP20333 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 AC126177.1-201ENST00000547829 2218 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 LAGE3P1-201ENST00000425356 484 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 RPS2P1-201ENST00000434010 821 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 DUSP5P1-201ENST00000441325 1139 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 PRELID1P1-202ENST00000567272 903 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 AC006557.2-201ENST00000592985 1240 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 AC012313.10-201ENST00000623509 926 ntBASIC15.29■□□□□ 0.04
TNFRSF1BP20333 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFRSF1BP20333 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms