Protein–RNA interactions for Protein: P20138

CD33, Myeloid cell surface antigen CD33, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD33P20138 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.3□□□□□ -0.28
CD33P20138 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.3□□□□□ -0.28
CD33P20138 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.3□□□□□ -0.28
CD33P20138 AC097637.2-201ENST00000624096 1997 ntBASIC13.3□□□□□ -0.28
CD33P20138 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CD33P20138 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.3□□□□□ -0.28
CD33P20138 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.3□□□□□ -0.28
CD33P20138 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CD33P20138 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.3□□□□□ -0.28
CD33P20138 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CD33P20138 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD33P20138 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.29□□□□□ -0.28
CD33P20138 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CD33P20138 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CD33P20138 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD33P20138 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.29□□□□□ -0.28
CD33P20138 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CD33P20138 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD33P20138 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CD33P20138 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.29□□□□□ -0.28
CD33P20138 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.29□□□□□ -0.28
CD33P20138 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC13.29□□□□□ -0.28
CD33P20138 YBX1P5-201ENST00000509441 847 ntBASIC13.29□□□□□ -0.28
CD33P20138 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.29□□□□□ -0.28
CD33P20138 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.29□□□□□ -0.28
CD33P20138 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.29□□□□□ -0.28
CD33P20138 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CD33P20138 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.29□□□□□ -0.28
CD33P20138 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD33P20138 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD33P20138 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD33P20138 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.29□□□□□ -0.28
CD33P20138 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD33P20138 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.28□□□□□ -0.28
CD33P20138 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.28□□□□□ -0.28
CD33P20138 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CD33P20138 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CD33P20138 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CD33P20138 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.28□□□□□ -0.28
CD33P20138 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.28□□□□□ -0.28
CD33P20138 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.28□□□□□ -0.28
CD33P20138 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CD33P20138 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.28□□□□□ -0.28
CD33P20138 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.28□□□□□ -0.28
CD33P20138 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.28□□□□□ -0.28
CD33P20138 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.28□□□□□ -0.28
CD33P20138 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC13.28□□□□□ -0.28
CD33P20138 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.28□□□□□ -0.28
CD33P20138 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.28□□□□□ -0.28
CD33P20138 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.28□□□□□ -0.28
CD33P20138 AL805961.1-202ENST00000641562 540 ntBASIC13.28□□□□□ -0.28
CD33P20138 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD33P20138 BCAR1-209ENST00000546196 1340 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms