Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.47□□□□□ -0.09
ATF1P18846 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.47□□□□□ -0.09
ATF1P18846 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.46□□□□□ -0.09
ATF1P18846 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATF1P18846 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.46□□□□□ -0.09
ATF1P18846 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.46□□□□□ -0.09
ATF1P18846 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.46□□□□□ -0.09
ATF1P18846 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 MIR3652-201ENST00000579335 131 ntBASIC14.46□□□□□ -0.09
ATF1P18846 AL121772.3-201ENST00000610840 674 ntBASIC14.46□□□□□ -0.09
ATF1P18846 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATF1P18846 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATF1P18846 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ATF1P18846 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.46□□□□□ -0.1
ATF1P18846 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ATF1P18846 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
ATF1P18846 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATF1P18846 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
ATF1P18846 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
ATF1P18846 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ATF1P18846 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
ATF1P18846 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATF1P18846 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATF1P18846 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ATF1P18846 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.45□□□□□ -0.1
ATF1P18846 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.45□□□□□ -0.1
ATF1P18846 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.45□□□□□ -0.1
ATF1P18846 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.45□□□□□ -0.1
ATF1P18846 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.45□□□□□ -0.1
ATF1P18846 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 MPDU1-223ENST00000582151 728 ntBASIC14.45□□□□□ -0.1
ATF1P18846 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.45□□□□□ -0.1
ATF1P18846 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 MTDHP4-201ENST00000600287 670 ntBASIC14.45□□□□□ -0.1
ATF1P18846 AC004706.3-202ENST00000621574 984 ntBASIC14.45□□□□□ -0.1
ATF1P18846 AF228730.7-201ENST00000641842 219 ntBASIC14.45□□□□□ -0.1
ATF1P18846 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.45□□□□□ -0.1
ATF1P18846 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATF1P18846 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms