Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PEX1O43933 AL645728.1-201ENST00000366221 2101 ntBASIC16.1■□□□□ 0.17
PEX1O43933 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PEX1O43933 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.1■□□□□ 0.17
PEX1O43933 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
PEX1O43933 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 AC079776.2-201ENST00000641154 1609 ntBASIC16.1■□□□□ 0.17
PEX1O43933 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PEX1O43933 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PEX1O43933 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.1■□□□□ 0.17
PEX1O43933 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PEX1O43933 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 AC025062.2-201ENST00000605477 670 ntBASIC16.1■□□□□ 0.17
PEX1O43933 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PEX1O43933 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.1■□□□□ 0.17
PEX1O43933 AC116407.3-201ENST00000623905 1129 ntBASIC16.1■□□□□ 0.17
PEX1O43933 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PEX1O43933 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.1■□□□□ 0.17
PEX1O43933 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PEX1O43933 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PEX1O43933 AL596087.1-201ENST00000400979 1969 ntBASIC16.09■□□□□ 0.17
PEX1O43933 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PEX1O43933 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
PEX1O43933 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PEX1O43933 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.09■□□□□ 0.17
PEX1O43933 AC013268.4-201ENST00000637413 2228 ntBASIC16.09■□□□□ 0.17
PEX1O43933 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PEX1O43933 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.09■□□□□ 0.17
PEX1O43933 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 BX005266.1-201ENST00000473402 457 ntBASIC16.09■□□□□ 0.17
PEX1O43933 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.09■□□□□ 0.17
PEX1O43933 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.09■□□□□ 0.17
PEX1O43933 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.09■□□□□ 0.17
PEX1O43933 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.09■□□□□ 0.17
PEX1O43933 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.09■□□□□ 0.17
PEX1O43933 AC073592.5-201ENST00000624854 528 ntBASIC16.09■□□□□ 0.17
PEX1O43933 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.09■□□□□ 0.17
PEX1O43933 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.09■□□□□ 0.17
PEX1O43933 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PEX1O43933 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PEX1O43933 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PEX1O43933 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.09■□□□□ 0.17
PEX1O43933 AC073347.1-201ENST00000421633 2643 ntBASIC16.09■□□□□ 0.17
PEX1O43933 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PEX1O43933 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PEX1O43933 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEX1O43933 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEX1O43933 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PEX1O43933 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEX1O43933 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PEX1O43933 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PEX1O43933 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PEX1O43933 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PEX1O43933 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEX1O43933 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEX1O43933 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEX1O43933 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms