Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHMP2AO43633 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.46■□□□□ 0.55
CHMP2AO43633 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHMP2AO43633 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2AO43633 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2AO43633 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP2AO43633 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2AO43633 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2AO43633 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2AO43633 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP2AO43633 AC005622.1-201ENST00000636801 1703 ntBASIC18.46■□□□□ 0.55
CHMP2AO43633 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP2AO43633 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP2AO43633 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP2AO43633 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
CHMP2AO43633 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP2AO43633 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP2AO43633 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP2AO43633 RFPL4AP1-201ENST00000530883 850 ntBASIC18.45■□□□□ 0.54
CHMP2AO43633 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CHMP2AO43633 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.45■□□□□ 0.54
CHMP2AO43633 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHMP2AO43633 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 AP3S2-216ENST00000617003 1561 ntBASIC18.45■□□□□ 0.54
CHMP2AO43633 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 LINC01144-201ENST00000626198 1710 ntBASIC18.45■□□□□ 0.54
CHMP2AO43633 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CHMP2AO43633 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP2AO43633 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHMP2AO43633 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP2AO43633 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP2AO43633 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP2AO43633 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.44■□□□□ 0.54
CHMP2AO43633 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHMP2AO43633 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 AC008677.1-201ENST00000519230 1561 ntBASIC18.44■□□□□ 0.54
CHMP2AO43633 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2AO43633 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.44■□□□□ 0.54
CHMP2AO43633 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 RARRES2P9-201ENST00000565168 469 ntBASIC18.44■□□□□ 0.54
CHMP2AO43633 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2AO43633 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2AO43633 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2AO43633 AP001059.3-201ENST00000619053 235 ntBASIC18.44■□□□□ 0.54
CHMP2AO43633 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.44■□□□□ 0.54
CHMP2AO43633 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP2AO43633 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP2AO43633 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP2AO43633 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP2AO43633 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.43■□□□□ 0.54
CHMP2AO43633 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.43■□□□□ 0.54
CHMP2AO43633 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHMP2AO43633 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CHMP2AO43633 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHMP2AO43633 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CHMP2AO43633 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.43■□□□□ 0.54
CHMP2AO43633 FAM86GP-201ENST00000448322 971 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms