Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MID1O15344 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
MID1O15344 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MID1O15344 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MID1O15344 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
MID1O15344 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.39■□□□□ 0.21
MID1O15344 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MID1O15344 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.39■□□□□ 0.21
MID1O15344 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
MID1O15344 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.39■□□□□ 0.21
MID1O15344 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MID1O15344 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.39■□□□□ 0.21
MID1O15344 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.39■□□□□ 0.21
MID1O15344 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 AL080243.2-201ENST00000418783 582 ntBASIC16.39■□□□□ 0.21
MID1O15344 AC009477.1-201ENST00000452936 217 ntBASIC16.39■□□□□ 0.21
MID1O15344 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.39■□□□□ 0.21
MID1O15344 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.39■□□□□ 0.21
MID1O15344 AC009118.2-201ENST00000613275 655 ntBASIC16.39■□□□□ 0.21
MID1O15344 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.39■□□□□ 0.21
MID1O15344 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.39■□□□□ 0.21
MID1O15344 UBALD1-205ENST00000590891 2641 ntBASIC16.39■□□□□ 0.21
MID1O15344 OR6D1P-203ENST00000641209 4860 ntBASIC16.39■□□□□ 0.21
MID1O15344 AC087499.5-201ENST00000452760 1342 ntBASIC16.39■□□□□ 0.21
MID1O15344 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MID1O15344 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.39■□□□□ 0.21
MID1O15344 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MID1O15344 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.38■□□□□ 0.21
MID1O15344 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MID1O15344 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.38■□□□□ 0.21
MID1O15344 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.38■□□□□ 0.21
MID1O15344 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
MID1O15344 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.38■□□□□ 0.21
MID1O15344 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.38■□□□□ 0.21
MID1O15344 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.38■□□□□ 0.21
MID1O15344 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.38■□□□□ 0.21
MID1O15344 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 AC009407.1-201ENST00000568958 598 ntBASIC16.38■□□□□ 0.21
MID1O15344 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
MID1O15344 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 AL844908.2-201ENST00000609461 460 ntBASIC16.38■□□□□ 0.21
MID1O15344 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.38■□□□□ 0.21
MID1O15344 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MID1O15344 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.38■□□□□ 0.21
MID1O15344 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MID1O15344 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MID1O15344 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms