Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 TSEN15P1-201ENST00000423257 515 ntBASIC17.07■□□□□ 0.32
SRRM3A6NNA2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 MTDHP4-201ENST00000600287 670 ntBASIC17.07■□□□□ 0.32
SRRM3A6NNA2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.07■□□□□ 0.32
SRRM3A6NNA2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 AC096633.1-201ENST00000422446 749 ntBASIC17.06■□□□□ 0.32
SRRM3A6NNA2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 DUX4L17-201ENST00000557360 1267 ntBASIC17.06■□□□□ 0.32
SRRM3A6NNA2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 AL139288.1-201ENST00000623748 933 ntBASIC17.06■□□□□ 0.32
SRRM3A6NNA2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRRM3A6NNA2 AC010491.1-201ENST00000563101 2797 ntBASIC17.06■□□□□ 0.32
SRRM3A6NNA2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 CEND1P1-201ENST00000451006 455 ntBASIC17.05■□□□□ 0.32
SRRM3A6NNA2 AC112698.1-201ENST00000510299 916 ntBASIC17.05■□□□□ 0.32
SRRM3A6NNA2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 AC012645.4-201ENST00000610691 1061 ntBASIC17.05■□□□□ 0.32
SRRM3A6NNA2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 ELL2P1-201ENST00000413990 1906 ntBASIC17.05■□□□□ 0.32
SRRM3A6NNA2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SRRM3A6NNA2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms