Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.75■□□□□ 0.43
USP15Q9Y4E8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 AC060834.1-201ENST00000443027 2032 ntBASIC17.74■□□□□ 0.43
USP15Q9Y4E8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 AC005412.3-201ENST00000580309 715 ntBASIC17.74■□□□□ 0.43
USP15Q9Y4E8 MIR4453-201ENST00000584019 89 ntBASIC17.74■□□□□ 0.43
USP15Q9Y4E8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.74■□□□□ 0.43
USP15Q9Y4E8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 ATP5G2P4-201ENST00000442175 420 ntBASIC17.73■□□□□ 0.43
USP15Q9Y4E8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 AC109635.5-201ENST00000533593 962 ntBASIC17.73■□□□□ 0.43
USP15Q9Y4E8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 AC004233.3-201ENST00000607794 1269 ntBASIC17.73■□□□□ 0.43
USP15Q9Y4E8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP15Q9Y4E8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 WASH6P-202ENST00000359512 1437 ntBASIC17.72■□□□□ 0.43
USP15Q9Y4E8 AC012569.1-201ENST00000591191 1524 ntBASIC17.72■□□□□ 0.43
USP15Q9Y4E8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USP15Q9Y4E8 KRT17P7-201ENST00000451704 1104 ntBASIC17.72■□□□□ 0.43
USP15Q9Y4E8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms