Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 AL365203.3-201ENST00000609742 2057 ntBASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 AC010491.1-201ENST00000563101 2797 ntBASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 AC022145.2-201ENST00000598203 171 ntBASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 AL513210.1-201ENST00000629608 234 ntBASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 AC084121.4-201ENST00000641598 221 ntBASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 AF228730.8-201ENST00000642140 221 ntBASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BLOC1S4Q9NUP1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 SPTSSB-204ENST00000617024 1292 ntBASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BLOC1S4Q9NUP1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.21■□□□□ 0.5
BLOC1S4Q9NUP1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AC098859.1-201ENST00000502915 1238 ntBASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AC093520.2-201ENST00000561830 333 ntBASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 CDC14C-201ENST00000428251 1719 ntBASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
BLOC1S4Q9NUP1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms