Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL21A1Q96P44 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.6■□□□□ 0.09
COL21A1Q96P44 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 AL671710.1-201ENST00000610245 2349 ntBASIC15.59■□□□□ 0.09
COL21A1Q96P44 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 AL591424.1-201ENST00000442569 1213 ntBASIC15.59■□□□□ 0.09
COL21A1Q96P44 HCG4B-203ENST00000450128 991 ntBASIC15.59■□□□□ 0.09
COL21A1Q96P44 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 AC027601.4-201ENST00000611259 610 ntBASIC15.59■□□□□ 0.09
COL21A1Q96P44 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COL21A1Q96P44 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COL21A1Q96P44 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL21A1Q96P44 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL21A1Q96P44 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
COL21A1Q96P44 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
COL21A1Q96P44 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
COL21A1Q96P44 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.58■□□□□ 0.09
COL21A1Q96P44 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL21A1Q96P44 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COL21A1Q96P44 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
COL21A1Q96P44 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL21A1Q96P44 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COL21A1Q96P44 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL21A1Q96P44 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL21A1Q96P44 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 AC007967.2-201ENST00000432613 625 ntBASIC15.58■□□□□ 0.08
COL21A1Q96P44 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 FAM185BP-201ENST00000443595 716 ntBASIC15.58■□□□□ 0.08
COL21A1Q96P44 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.58■□□□□ 0.08
COL21A1Q96P44 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 CXCL1P1-201ENST00000502804 216 ntBASIC15.58■□□□□ 0.08
COL21A1Q96P44 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 MPDU1-223ENST00000582151 728 ntBASIC15.58■□□□□ 0.08
COL21A1Q96P44 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 AC064836.3-201ENST00000607928 673 ntBASIC15.58■□□□□ 0.08
COL21A1Q96P44 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COL21A1Q96P44 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
COL21A1Q96P44 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms