Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SNX31Q8N9S9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 MRPL20P1-201ENST00000400819 433 ntBASIC16.29■□□□□ 0.2
SNX31Q8N9S9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 AL139011.1-202ENST00000642063 584 ntBASIC16.29■□□□□ 0.2
SNX31Q8N9S9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 AC068418.2-201ENST00000577309 3703 ntBASIC16.29■□□□□ 0.2
SNX31Q8N9S9 AL353732.1-201ENST00000569618 1459 ntBASIC16.29■□□□□ 0.2
SNX31Q8N9S9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX31Q8N9S9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AC129492.6-201ENST00000611383 1305 ntBASIC16.28■□□□□ 0.2
SNX31Q8N9S9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AL031284.1-201ENST00000419297 478 ntBASIC16.28■□□□□ 0.2
SNX31Q8N9S9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AC108073.2-201ENST00000464002 357 ntBASIC16.28■□□□□ 0.2
SNX31Q8N9S9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 MIR4492-201ENST00000581627 80 ntBASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AL049840.3-201ENST00000602669 611 ntBASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AC004790.2-201ENST00000623588 572 ntBASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AC117500.6-201ENST00000624871 588 ntBASIC16.28■□□□□ 0.2
SNX31Q8N9S9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX31Q8N9S9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 SLC22A20-204ENST00000530038 1673 ntBASIC16.27■□□□□ 0.2
SNX31Q8N9S9 AC022188.1-201ENST00000620960 1664 ntBASIC16.27■□□□□ 0.2
SNX31Q8N9S9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNX31Q8N9S9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms