Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 AC190387.1-201ENST00000551683 408 ntBASIC18.28■□□□□ 0.52
TRIM50Q86XT4 AC020765.3-201ENST00000613051 740 ntBASIC18.28■□□□□ 0.52
TRIM50Q86XT4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 CETN4P-206ENST00000642099 2168 ntBASIC18.28■□□□□ 0.52
TRIM50Q86XT4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 AL589702.1-201ENST00000641229 1509 ntBASIC18.28■□□□□ 0.52
TRIM50Q86XT4 AC080080.1-201ENST00000625121 2420 ntBASIC18.28■□□□□ 0.52
TRIM50Q86XT4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM50Q86XT4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 AL080243.2-201ENST00000418783 582 ntBASIC18.27■□□□□ 0.52
TRIM50Q86XT4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 AL844908.2-201ENST00000609461 460 ntBASIC18.27■□□□□ 0.52
TRIM50Q86XT4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM50Q86XT4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM50Q86XT4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM50Q86XT4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM50Q86XT4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM50Q86XT4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM50Q86XT4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM50Q86XT4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM50Q86XT4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 AC008738.7-201ENST00000609744 511 ntBASIC18.26■□□□□ 0.51
TRIM50Q86XT4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM50Q86XT4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM50Q86XT4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms