Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 FLJ38576-201ENST00000623820 2459 ntBASIC15.78■□□□□ 0.12
RNF44Q7L0R7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 PCGF3-213ENST00000620529 1899 ntBASIC15.78■□□□□ 0.12
RNF44Q7L0R7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF44Q7L0R7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 MIR346-201ENST00000362234 95 ntBASIC15.77■□□□□ 0.12
RNF44Q7L0R7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 AC142381.1-201ENST00000426099 345 ntBASIC15.77■□□□□ 0.12
RNF44Q7L0R7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.77■□□□□ 0.12
RNF44Q7L0R7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
RNF44Q7L0R7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 UBALD1-205ENST00000590891 2641 ntBASIC15.76■□□□□ 0.11
RNF44Q7L0R7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 KRT18P32-201ENST00000424695 1287 ntBASIC15.76■□□□□ 0.11
RNF44Q7L0R7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF44Q7L0R7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF44Q7L0R7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms