Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 AC007191.1-201ENST00000623179 2995 ntBASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 AC073592.4-201ENST00000623827 446 ntBASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 NORAD-201ENST00000565493 5339 ntBASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 KRT126P-201ENST00000549467 1181 ntBASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TMEM53Q6P2H8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 FGFR3P6-201ENST00000457012 610 ntBASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM53Q6P2H8 BX005266.1-201ENST00000473402 457 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms