Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB2Q6NT52 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CGB2Q6NT52 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 AC113347.1-201ENST00000413321 391 ntBASIC16.1■□□□□ 0.17
CGB2Q6NT52 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CGB2Q6NT52 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CGB2Q6NT52 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 C18orf15-201ENST00000623680 2534 ntBASIC16.09■□□□□ 0.17
CGB2Q6NT52 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 AC087163.2-201ENST00000457299 853 ntBASIC16.09■□□□□ 0.17
CGB2Q6NT52 KRT8P26-201ENST00000534154 1276 ntBASIC16.09■□□□□ 0.17
CGB2Q6NT52 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 TMEM191A-211ENST00000637163 1067 ntBASIC16.09■□□□□ 0.17
CGB2Q6NT52 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 AL390755.1-201ENST00000623716 2027 ntBASIC16.09■□□□□ 0.17
CGB2Q6NT52 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CGB2Q6NT52 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CGB2Q6NT52 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CGB2Q6NT52 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CGB2Q6NT52 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.08■□□□□ 0.17
CGB2Q6NT52 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CGB2Q6NT52 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms