Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 AP002414.1-201ENST00000391405 1147 ntBASIC15.55■□□□□ 0.08
LPCAT4Q643R3 HMGA1P5-201ENST00000412453 271 ntBASIC15.55■□□□□ 0.08
LPCAT4Q643R3 POU5F1P6-201ENST00000466990 990 ntBASIC15.55■□□□□ 0.08
LPCAT4Q643R3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 GPR32P1-201ENST00000601788 811 ntBASIC15.55■□□□□ 0.08
LPCAT4Q643R3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.55■□□□□ 0.08
LPCAT4Q643R3 LINC01101-201ENST00000622953 1884 ntBASIC15.54■□□□□ 0.08
LPCAT4Q643R3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 FLJ16779-201ENST00000612722 7638 ntBASIC15.54■□□□□ 0.08
LPCAT4Q643R3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 AC003669.1-201ENST00000334569 611 ntBASIC15.54■□□□□ 0.08
LPCAT4Q643R3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 MIR4785-201ENST00000585005 73 ntBASIC15.54■□□□□ 0.08
LPCAT4Q643R3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 AC087481.3-201ENST00000602886 1894 ntBASIC15.54■□□□□ 0.08
LPCAT4Q643R3 PCGF3-213ENST00000620529 1899 ntBASIC15.54■□□□□ 0.08
LPCAT4Q643R3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LPCAT4Q643R3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 AC125634.1-201ENST00000438758 1403 ntBASIC15.53■□□□□ 0.08
LPCAT4Q643R3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LPCAT4Q643R3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms