Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 AC004449.1-201ENST00000564240 433 ntBASIC17.44■□□□□ 0.38
CACNA2D1P54289 AC073389.1-201ENST00000595595 795 ntBASIC17.44■□□□□ 0.38
CACNA2D1P54289 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.44■□□□□ 0.38
CACNA2D1P54289 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 DOC2GP-204ENST00000639052 2548 ntBASIC17.44■□□□□ 0.38
CACNA2D1P54289 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.44■□□□□ 0.38
CACNA2D1P54289 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CACNA2D1P54289 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 CROCCP1-201ENST00000426910 5675 ntBASIC17.43■□□□□ 0.38
CACNA2D1P54289 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA2D1P54289 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA2D1P54289 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA2D1P54289 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA2D1P54289 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA2D1P54289 AL645939.2-201ENST00000427340 991 ntBASIC17.43■□□□□ 0.38
CACNA2D1P54289 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 HLA-J-202ENST00000469281 1241 ntBASIC17.43■□□□□ 0.38
CACNA2D1P54289 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 PRYP6-201ENST00000514804 343 ntBASIC17.43■□□□□ 0.38
CACNA2D1P54289 AC026150.2-201ENST00000564693 1156 ntBASIC17.43■□□□□ 0.38
CACNA2D1P54289 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 PCDHA1-201ENST00000378133 2726 ntBASIC17.43■□□□□ 0.38
CACNA2D1P54289 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA2D1P54289 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA2D1P54289 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CACNA2D1P54289 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.43■□□□□ 0.38
CACNA2D1P54289 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 AC008741.2-201ENST00000612792 3115 ntBASIC17.42■□□□□ 0.38
CACNA2D1P54289 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 Z92544.3-201ENST00000624747 417 ntBASIC17.42■□□□□ 0.38
CACNA2D1P54289 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.42■□□□□ 0.38
CACNA2D1P54289 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNA2D1P54289 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms