Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC1A3P43003 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A3P43003 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC1A3P43003 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 IGLL3P-201ENST00000412472 434 ntBASIC15.17■□□□□ 0.02
SLC1A3P43003 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A3P43003 AC096734.2-201ENST00000562054 433 ntBASIC15.17■□□□□ 0.02
SLC1A3P43003 AL031432.2-201ENST00000566714 459 ntBASIC15.17■□□□□ 0.02
SLC1A3P43003 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A3P43003 AL928711.1-201ENST00000570165 459 ntBASIC15.17■□□□□ 0.02
SLC1A3P43003 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC1A3P43003 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC1A3P43003 AC104109.2-201ENST00000602919 1418 ntBASIC15.17■□□□□ 0.02
SLC1A3P43003 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC1A3P43003 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A3P43003 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC1A3P43003 AC005052.1-201ENST00000625181 2492 ntBASIC15.16■□□□□ 0.02
SLC1A3P43003 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
SLC1A3P43003 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 RHOQP3-201ENST00000437982 621 ntBASIC15.16■□□□□ 0.02
SLC1A3P43003 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.16■□□□□ 0.02
SLC1A3P43003 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC1A3P43003 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.16■□□□□ 0.02
SLC1A3P43003 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A3P43003 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A3P43003 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC1A3P43003 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC1A3P43003 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 GPAA1P2-202ENST00000606848 1787 ntBASIC15.16■□□□□ 0.02
SLC1A3P43003 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SLC1A3P43003 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC1A3P43003 IL9RP2-201ENST00000423948 1312 ntBASIC15.16■□□□□ 0.02
SLC1A3P43003 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC1A3P43003 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC1A3P43003 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A3P43003 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A3P43003 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC1A3P43003 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC1A3P43003 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC1A3P43003 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC1A3P43003 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms