Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.33■□□□□ 0.2
GABRB3P28472 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GABRB3P28472 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABRB3P28472 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.33■□□□□ 0.2
GABRB3P28472 AC018845.2-201ENST00000568326 409 ntBASIC16.33■□□□□ 0.2
GABRB3P28472 AC023141.13-201ENST00000604991 943 ntBASIC16.33■□□□□ 0.2
GABRB3P28472 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GABRB3P28472 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.33■□□□□ 0.2
GABRB3P28472 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABRB3P28472 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
GABRB3P28472 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.33■□□□□ 0.2
GABRB3P28472 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GABRB3P28472 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABRB3P28472 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABRB3P28472 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
GABRB3P28472 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.33■□□□□ 0.2
GABRB3P28472 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.33■□□□□ 0.2
GABRB3P28472 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
GABRB3P28472 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.33■□□□□ 0.2
GABRB3P28472 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.33■□□□□ 0.2
GABRB3P28472 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GABRB3P28472 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.32■□□□□ 0.2
GABRB3P28472 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GABRB3P28472 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
GABRB3P28472 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 TPM4P1-201ENST00000436100 807 ntBASIC16.32■□□□□ 0.2
GABRB3P28472 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
GABRB3P28472 AC093724.1-201ENST00000448659 1027 ntBASIC16.32■□□□□ 0.2
GABRB3P28472 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GABRB3P28472 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.32■□□□□ 0.2
GABRB3P28472 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.32■□□□□ 0.2
GABRB3P28472 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.32■□□□□ 0.2
GABRB3P28472 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.32■□□□□ 0.2
GABRB3P28472 AP005117.1-202ENST00000581724 1908 ntBASIC16.32■□□□□ 0.2
GABRB3P28472 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.32■□□□□ 0.2
GABRB3P28472 AC025580.3-201ENST00000617932 1424 ntBASIC16.32■□□□□ 0.2
GABRB3P28472 AC004877.2-201ENST00000623941 599 ntBASIC16.32■□□□□ 0.2
GABRB3P28472 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GABRB3P28472 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.32■□□□□ 0.2
GABRB3P28472 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GABRB3P28472 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GABRB3P28472 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.31■□□□□ 0.2
GABRB3P28472 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
GABRB3P28472 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 U82695.1-201ENST00000635752 1889 ntBASIC16.31■□□□□ 0.2
GABRB3P28472 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.31■□□□□ 0.2
GABRB3P28472 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
GABRB3P28472 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.31■□□□□ 0.2
GABRB3P28472 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 AC064836.3-201ENST00000607928 673 ntBASIC16.31■□□□□ 0.2
GABRB3P28472 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GABRB3P28472 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.31■□□□□ 0.2
GABRB3P28472 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.31■□□□□ 0.2
GABRB3P28472 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms