Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.24■□□□□ 0.19
VARSP26640 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
VARSP26640 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.24■□□□□ 0.19
VARSP26640 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
VARSP26640 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.24■□□□□ 0.19
VARSP26640 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VARSP26640 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.24■□□□□ 0.19
VARSP26640 AC092364.2-201ENST00000596710 2692 ntBASIC16.24■□□□□ 0.19
VARSP26640 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VARSP26640 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.24■□□□□ 0.19
VARSP26640 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.24■□□□□ 0.19
VARSP26640 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.24■□□□□ 0.19
VARSP26640 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
VARSP26640 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VARSP26640 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.23■□□□□ 0.19
VARSP26640 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VARSP26640 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VARSP26640 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.23■□□□□ 0.19
VARSP26640 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.23■□□□□ 0.19
VARSP26640 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VARSP26640 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VARSP26640 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.23■□□□□ 0.19
VARSP26640 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
VARSP26640 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VARSP26640 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
VARSP26640 RPS8P6-201ENST00000426177 609 ntBASIC16.23■□□□□ 0.19
VARSP26640 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.23■□□□□ 0.19
VARSP26640 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.23■□□□□ 0.19
VARSP26640 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 AC009947.1-201ENST00000444350 727 ntBASIC16.23■□□□□ 0.19
VARSP26640 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.23■□□□□ 0.19
VARSP26640 MIR4751-201ENST00000578027 74 ntBASIC16.23■□□□□ 0.19
VARSP26640 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.23■□□□□ 0.19
VARSP26640 AC013467.2-201ENST00000605472 835 ntBASIC16.23■□□□□ 0.19
VARSP26640 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 AC105917.1-201ENST00000506637 2539 ntBASIC16.23■□□□□ 0.19
VARSP26640 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.23■□□□□ 0.19
VARSP26640 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VARSP26640 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.23■□□□□ 0.19
VARSP26640 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.23■□□□□ 0.19
VARSP26640 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.22■□□□□ 0.19
VARSP26640 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.22■□□□□ 0.19
VARSP26640 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 ALOX12P2-203ENST00000570921 1945 ntBASIC16.22■□□□□ 0.19
VARSP26640 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.22■□□□□ 0.19
VARSP26640 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VARSP26640 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.22■□□□□ 0.19
VARSP26640 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.22■□□□□ 0.19
VARSP26640 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.22■□□□□ 0.19
VARSP26640 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.22■□□□□ 0.19
VARSP26640 AC027796.2-201ENST00000575326 344 ntBASIC16.22■□□□□ 0.19
VARSP26640 RN7SL602P-201ENST00000578326 324 ntBASIC16.22■□□□□ 0.19
VARSP26640 MIR4492-201ENST00000581627 80 ntBASIC16.22■□□□□ 0.19
VARSP26640 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.22■□□□□ 0.19
VARSP26640 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.22■□□□□ 0.19
VARSP26640 AC134684.3-201ENST00000641758 218 ntBASIC16.22■□□□□ 0.19
VARSP26640 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VARSP26640 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms