Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CDC14C-201ENST00000428251 1719 ntBASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 AL031731.1-201ENST00000642131 2094 ntBASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.62■■□□□ 1.05
CSB-PGBD3P0DP91 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 AL645728.1-201ENST00000366221 2101 ntBASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 AP002490.2-201ENST00000524791 560 ntBASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 RRP7BP-205ENST00000566851 833 ntBASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSB-PGBD3P0DP91 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.6■■□□□ 1.05
CSB-PGBD3P0DP91 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 AC025048.3-201ENST00000590609 569 ntBASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 AC005702.4-201ENST00000618393 416 ntBASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 AC018470.1-201ENST00000624790 3129 ntBASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSB-PGBD3P0DP91 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 FAM86MP-201ENST00000340703 885 ntBASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 BNIP3P42-201ENST00000454982 569 ntBASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 AC104989.1-201ENST00000519711 778 ntBASIC21.58■■□□□ 1.05
CSB-PGBD3P0DP91 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms