Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC01144-201ENST00000626198 1710 ntBASIC17.94■□□□□ 0.46
VTNP04004 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.94■□□□□ 0.46
VTNP04004 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VTNP04004 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.94■□□□□ 0.46
VTNP04004 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
VTNP04004 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.94■□□□□ 0.46
VTNP04004 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.94■□□□□ 0.46
VTNP04004 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VTNP04004 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.93■□□□□ 0.46
VTNP04004 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VTNP04004 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.93■□□□□ 0.46
VTNP04004 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.93■□□□□ 0.46
VTNP04004 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.93■□□□□ 0.46
VTNP04004 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.93■□□□□ 0.46
VTNP04004 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.93■□□□□ 0.46
VTNP04004 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.93■□□□□ 0.46
VTNP04004 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.93■□□□□ 0.46
VTNP04004 AC009118.2-201ENST00000613275 655 ntBASIC17.93■□□□□ 0.46
VTNP04004 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.93■□□□□ 0.46
VTNP04004 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.93■□□□□ 0.46
VTNP04004 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.93■□□□□ 0.46
VTNP04004 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.93■□□□□ 0.46
VTNP04004 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.93■□□□□ 0.46
VTNP04004 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.93■□□□□ 0.46
VTNP04004 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.93■□□□□ 0.46
VTNP04004 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VTNP04004 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.93■□□□□ 0.46
VTNP04004 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VTNP04004 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.92■□□□□ 0.46
VTNP04004 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.92■□□□□ 0.46
VTNP04004 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
VTNP04004 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.92■□□□□ 0.46
VTNP04004 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.92■□□□□ 0.46
VTNP04004 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VTNP04004 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
VTNP04004 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VTNP04004 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VTNP04004 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
VTNP04004 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VTNP04004 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.91■□□□□ 0.46
VTNP04004 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
VTNP04004 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VTNP04004 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms