Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.4■□□□□ 0.54
GGPS1O95749 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GGPS1O95749 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
GGPS1O95749 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.39■□□□□ 0.54
GGPS1O95749 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
GGPS1O95749 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
GGPS1O95749 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.39■□□□□ 0.53
GGPS1O95749 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
GGPS1O95749 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
GGPS1O95749 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
GGPS1O95749 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
GGPS1O95749 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.39■□□□□ 0.53
GGPS1O95749 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.39■□□□□ 0.53
GGPS1O95749 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.39■□□□□ 0.53
GGPS1O95749 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.39■□□□□ 0.53
GGPS1O95749 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.39■□□□□ 0.53
GGPS1O95749 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.39■□□□□ 0.53
GGPS1O95749 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 AF228730.6-201ENST00000641497 218 ntBASIC18.39■□□□□ 0.53
GGPS1O95749 AC084121.3-201ENST00000641716 218 ntBASIC18.39■□□□□ 0.53
GGPS1O95749 AC105233.6-201ENST00000642093 218 ntBASIC18.39■□□□□ 0.53
GGPS1O95749 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
GGPS1O95749 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.39■□□□□ 0.53
GGPS1O95749 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.39■□□□□ 0.53
GGPS1O95749 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
GGPS1O95749 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.39■□□□□ 0.53
GGPS1O95749 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GGPS1O95749 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.38■□□□□ 0.53
GGPS1O95749 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.38■□□□□ 0.53
GGPS1O95749 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GGPS1O95749 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.38■□□□□ 0.53
GGPS1O95749 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.38■□□□□ 0.53
GGPS1O95749 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.38■□□□□ 0.53
GGPS1O95749 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.38■□□□□ 0.53
GGPS1O95749 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.38■□□□□ 0.53
GGPS1O95749 AC024267.1-201ENST00000582320 895 ntBASIC18.38■□□□□ 0.53
GGPS1O95749 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
GGPS1O95749 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.38■□□□□ 0.53
GGPS1O95749 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.38■□□□□ 0.53
GGPS1O95749 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GGPS1O95749 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.38■□□□□ 0.53
GGPS1O95749 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
GGPS1O95749 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.38■□□□□ 0.53
GGPS1O95749 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GGPS1O95749 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.38■□□□□ 0.53
GGPS1O95749 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.37■□□□□ 0.53
GGPS1O95749 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.37■□□□□ 0.53
GGPS1O95749 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
GGPS1O95749 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.37■□□□□ 0.53
GGPS1O95749 RNF216P1-203ENST00000404404 2427 ntBASIC18.37■□□□□ 0.53
GGPS1O95749 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 AC009477.1-201ENST00000452936 217 ntBASIC18.37■□□□□ 0.53
GGPS1O95749 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.37■□□□□ 0.53
GGPS1O95749 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.37■□□□□ 0.53
GGPS1O95749 AL079307.3-201ENST00000556114 283 ntBASIC18.37■□□□□ 0.53
GGPS1O95749 AC061975.2-201ENST00000581722 295 ntBASIC18.37■□□□□ 0.53
GGPS1O95749 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.37■□□□□ 0.53
GGPS1O95749 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.37■□□□□ 0.53
GGPS1O95749 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.37■□□□□ 0.53
GGPS1O95749 AC087499.5-201ENST00000452760 1342 ntBASIC18.37■□□□□ 0.53
GGPS1O95749 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.37■□□□□ 0.53
GGPS1O95749 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GGPS1O95749 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GGPS1O95749 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.37■□□□□ 0.53
GGPS1O95749 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms