Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRCH4O75427 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.09■□□□□ 0.33
LRCH4O75427 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.09■□□□□ 0.33
LRCH4O75427 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRCH4O75427 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.09■□□□□ 0.33
LRCH4O75427 MIR574-201ENST00000385209 96 ntBASIC17.09■□□□□ 0.33
LRCH4O75427 AL022342.1-201ENST00000400363 863 ntBASIC17.09■□□□□ 0.33
LRCH4O75427 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.09■□□□□ 0.33
LRCH4O75427 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.09■□□□□ 0.33
LRCH4O75427 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.09■□□□□ 0.33
LRCH4O75427 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRCH4O75427 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRCH4O75427 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LRCH4O75427 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRCH4O75427 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LRCH4O75427 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRCH4O75427 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.08■□□□□ 0.33
LRCH4O75427 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRCH4O75427 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.08■□□□□ 0.33
LRCH4O75427 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 MIR940-201ENST00000401276 94 ntBASIC17.08■□□□□ 0.32
LRCH4O75427 PGAM5P1-201ENST00000518923 814 ntBASIC17.08■□□□□ 0.32
LRCH4O75427 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.08■□□□□ 0.32
LRCH4O75427 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LRCH4O75427 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.08■□□□□ 0.32
LRCH4O75427 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.08■□□□□ 0.32
LRCH4O75427 AC091812.2-201ENST00000619081 385 ntBASIC17.08■□□□□ 0.32
LRCH4O75427 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LRCH4O75427 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.08■□□□□ 0.32
LRCH4O75427 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LRCH4O75427 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRCH4O75427 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRCH4O75427 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
LRCH4O75427 CDC14C-201ENST00000428251 1719 ntBASIC17.07■□□□□ 0.32
LRCH4O75427 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 KRT18P58-201ENST00000527480 1120 ntBASIC17.07■□□□□ 0.32
LRCH4O75427 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.07■□□□□ 0.32
LRCH4O75427 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.07■□□□□ 0.32
LRCH4O75427 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.07■□□□□ 0.32
LRCH4O75427 AL671883.3-201ENST00000603274 991 ntBASIC17.07■□□□□ 0.32
LRCH4O75427 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LRCH4O75427 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LRCH4O75427 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
LRCH4O75427 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRCH4O75427 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms